| Item type |
学術雑誌論文 / Journal Article(1) |
| 公開日 |
2019-09-27 |
| タイトル |
|
|
タイトル |
Bayesian QTL mapping using genome-wide SSR markers and segregating population derived from a cross of two commercial F1 hybrids of tomato |
| タイトル |
|
|
タイトル |
Bayesian QTL mapping using genome-wide SSR markers and segregating population derived from a cross of two commercial F1 hybrids of tomato |
|
言語 |
en |
| 言語 |
|
|
言語 |
eng |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
Linkage Group |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
Soluble Solid Content |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
Average Fruit Weight |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
Interval Mapping Method |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
Total Fruit Weight |
| キーワード |
|
|
言語 |
en |
|
主題Scheme |
Other |
|
主題 |
Linkage Group |
| キーワード |
|
|
言語 |
en |
|
主題Scheme |
Other |
|
主題 |
Soluble Solid Content |
| キーワード |
|
|
言語 |
en |
|
主題Scheme |
Other |
|
主題 |
Average Fruit Weight |
| キーワード |
|
|
言語 |
en |
|
主題Scheme |
Other |
|
主題 |
Interval Mapping Method |
| キーワード |
|
|
言語 |
en |
|
主題Scheme |
Other |
|
主題 |
Total Fruit Weight |
| 資源タイプ |
|
|
資源タイプ識別子 |
http://purl.org/coar/resource_type/c_6501 |
|
資源タイプ |
journal article |
| 著者 |
大山, 暁男
松永, 啓
根来, 里美
宮武, 宏治
山口, 博隆
布目, 司
福岡, 浩之
林, 武司
|
| 抄録 |
|
|
内容記述タイプ |
Abstract |
|
内容記述 |
Key message
Using newly developed euchromatin-derived genomic SSR markers and a flexible Bayesian mapping method, 13 significant agricultural QTLs were identified in a segregating population derived from a four-way cross of tomato.
Abstract
So far, many QTL mapping studies in tomato have been performed for progeny obtained from crosses between two genetically distant parents, e.g., domesticated tomatoes and wild relatives. However, QTL information of quantitative traits related to yield (e.g., flower or fruit number, and total or average weight of fruits) in such intercross populations would be of limited use for breeding commercial tomato cultivars because individuals in the populations have specific genetic backgrounds underlying extremely different phenotypes between the parents such as large fruit in domesticated tomatoes and small fruit in wild relatives, which may not be reflective of the genetic variation in tomato breeding populations. In this study, we constructed F2 population derived from a cross between two commercial F1 cultivars in tomato to extract QTL information practical for tomato breeding. This cross corresponded to a four-way cross, because the four parental lines of the two F1 cultivars were considered to be the founders. We developed 2510 new expressed sequence tag (EST)-based (euchromatin-derived) genomic SSR markers and selected 262 markers from these new SSR markers and publicly available SSR markers to construct a linkage map. QTL analysis for ten agricultural traits of tomato was performed based on the phenotypes and marker genotypes of F2 plants using a flexible Bayesian method. As results, 13 QTL regions were detected for six traits by the Bayesian method developed in this study. |
| 書誌情報 |
Theoretical and Applied Genetics
en : Theoretical and Applied Genetics
巻 130,
号 8,
p. 1601-1616,
発行日 2017-05-05
|
| 出版者 |
|
|
出版者 |
Springer Nature |
| ISSN |
|
|
収録物識別子タイプ |
ISSN |
|
収録物識別子 |
0040-5752 |
| DOI |
|
|
関連タイプ |
isVersionOf |
|
|
識別子タイプ |
DOI |
|
|
関連識別子 |
10.1007/s00122-017-2913-5 |
| 情報源 |
|
|
|
関連名称 |
SC30201804060024 |
| 情報源 |
|
|
|
関連名称 |
NARO成果DBa |
| 情報源 |
|
|
|
関連名称 |
author manuscript Green open Access /This journal has an embargo period of 12 months. |
| 情報源 |
|
|
|
関連名称 |
このアーカイブは著者版です。出版社版ではありません。引用の際には出版社版をご利用ください。 |
| 情報源 |
|
|
|
関連名称 |
This is not the published version. Please cite only the published version. |
| 情報源 |
|
|
|
関連名称 |
This is a post-peer-review, pre-copyedit version of an article published in [Theoretical and Applied Genetics]. |
| 情報源 |
|
|
|
関連名称 |
The final authenticated version is available online at: http://dx.doi.org/10.1007/s00122-017-2913-5 |
| 関連サイト |
|
|
|
識別子タイプ |
DOI |
|
|
関連識別子 |
https://doi.org/10.1007/s00122-017-2913-5 |
|
|
関連名称 |
Theoretical and Applied Genetics |
| 著者版フラグ |
|
|
出版タイプ |
AM |
|
出版タイプResource |
http://purl.org/coar/version/c_ab4af688f83e57aa |
SC30201804060024-C30201711080002_Postprint (1.2 MB)
.png)
