{"created":"2023-05-15T13:38:42.228663+00:00","id":2712,"links":{},"metadata":{"_buckets":{"deposit":"aad5527f-8803-4d65-8a7c-bda65bf19001"},"_deposit":{"created_by":11,"id":"2712","owners":[11],"pid":{"revision_id":0,"type":"depid","value":"2712"},"status":"published"},"_oai":{"id":"oai:repository.naro.go.jp:00002712","sets":["2:581:137","87:653:40"]},"author_link":["424","420","1563","418"],"item_10001_biblio_info_7":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2018-04","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"2","bibliographicPageStart":"28","bibliographicVolumeNumber":"14","bibliographic_titles":[{"bibliographic_title":"Tree Genetics & Genomes"},{"bibliographic_title":"Tree Genetics & Genomes","bibliographic_titleLang":"en"}]}]},"item_10001_description_5":{"attribute_name":"抄録","attribute_value_mlt":[{"subitem_description":"Pollination-constant non-astringent (PCNA) trait is desirable in persimmon production because it confers natural astringency loss in mature persimmon fruit. Expression of the PCNA trait requires six homozygous recessive PCNA (ast) alleles at the single ASTRINGENCY (AST) locus in hexaploid persimmon. When crossing non-PCNA accessions to breed PCNA offspring, knowledge of ast and non-PCNA (AST) allele dosage in the parental accessions is important, because more PCNA offspring can segregate from a non-PCNA parent with more ast and fewer AST alleles. Previously, we have demonstrated that a region linked to the AST locus has numerous fragment size polymorphisms with varying numbers of simple sequence repeats. Here, we reveal the polymorphisms in this region in a broad collection of persimmon germplasms. Among 237 accessions, we distinguished 21 AST- and 5 ast-linked fragments with different sizes. Based on the number of fragments detected per individual, we identified 21 non-PCNA accessions with three different ast alleles; by crossing these with a PCNA parent, we obtain PCNA offspring under autohexaploid inheritance. Furthermore, AST and ast allelic combination patterns in hexaploid persimmon were shown to be applicable to cultivar identification of non-PCNA accessions. We directly sequenced ast-linked fragments from 48 accessions with one-size peak of ast-linked fragment and found two distinctive groups of fragments based on single nucleotide polymorphisms. This result suggests that a bottleneck event occurred during ast allele development. We conclude that our fragment size profile can be used to accelerate PCNA breeding that uses non-PCNA parents and to study ast allele accumulation in persimmon.","subitem_description_type":"Abstract"}]},"item_10001_publisher_8":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"Springer Nature"}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_type":"isVersionOf","subitem_relation_type_id":{"subitem_relation_type_id_text":"10.1007/s11295-018-1239-z","subitem_relation_type_select":"DOI"}}]},"item_10001_relation_16":{"attribute_name":"情報源","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"SC30201804040003"}]},{"subitem_relation_name":[{"subitem_relation_name_text":"NARO成果DBa"}]},{"subitem_relation_name":[{"subitem_relation_name_text":"C30201803160001_4286.pdf;C30201803160001_4287.pdf;C30201803160001_4285.pdf"}]},{"subitem_relation_name":[{"subitem_relation_name_text":"This is a post-peer-review, pre-copyedit version of an article published in [Tree Genetics & Genomes]. The final authenticated version is available online at: http://dx.doi.org/10.1007/s11295-018-1239-z”. The original publication is available at www.springerlink.com"}]},{"subitem_relation_name":[{"subitem_relation_name_text":"このアーカイブは著者版です。出版社版ではありません。引用の際には出版社版をご利用ください。"}]},{"subitem_relation_name":[{"subitem_relation_name_text":"This is not the published version. Please cite only the published version. "}]},{"subitem_relation_name":[{"subitem_relation_name_text":"Green open Access /This journal has an embargo period of 12 months."}]}]},"item_10001_relation_17":{"attribute_name":"関連サイト","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"Tree Genetics & Genomes"}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://doi.org/10.1007/s11295-018-1239-z","subitem_relation_type_select":"DOI"}}]},"item_10001_source_id_9":{"attribute_name":"ISSN","attribute_value_mlt":[{"subitem_source_identifier":"1614-2942","subitem_source_identifier_type":"ISSN"}]},"item_10001_version_type_20":{"attribute_name":"著者版フラグ","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_ab4af688f83e57aa","subitem_version_type":"AM"}]},"item_creator":{"attribute_name":"著者","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"尾上, 典之"},{"creatorName":"オノウエ, ノリユキ","creatorNameLang":"ja-Kana"},{"creatorName":"ONOUE, Noriyuki","creatorNameLang":"en"}],"nameIdentifiers":[{"nameIdentifier":"1563","nameIdentifierScheme":"WEKO"},{"nameIdentifier":"50613121","nameIdentifierScheme":"e-Rad","nameIdentifierURI":"https://kaken.nii.ac.jp/ja/search/?qm=50613121"},{"nameIdentifier":"nonoue","nameIdentifierScheme":"researchmap","nameIdentifierURI":"http://researchmap.jp/nonoue"}]},{"creatorNames":[{"creatorName":"小林, 省藏"},{"creatorName":"コバヤシ, ショウゾウ","creatorNameLang":"ja-Kana"},{"creatorName":"KOBAYASHI, Shozo","creatorNameLang":"en"}],"nameIdentifiers":[{"nameIdentifier":"424","nameIdentifierScheme":"WEKO"},{"nameIdentifier":"90355438","nameIdentifierScheme":"e-Rad","nameIdentifierURI":"https://kaken.nii.ac.jp/ja/search/?qm=90355438"},{"nameIdentifier":"read0004498","nameIdentifierScheme":"researchmap","nameIdentifierURI":"http://researchmap.jp/read0004498"}]},{"creatorNames":[{"creatorName":"河野, 淳"},{"creatorName":"コウノ, アツシ","creatorNameLang":"ja-Kana"},{"creatorName":"KONO, Atsushi","creatorNameLang":"en"}],"nameIdentifiers":[{"nameIdentifier":"420","nameIdentifierScheme":"WEKO"},{"nameIdentifier":"90442772","nameIdentifierScheme":"e-Rad","nameIdentifierURI":"https://kaken.nii.ac.jp/ja/search/?qm=90442772"},{"nameIdentifier":"read0165203","nameIdentifierScheme":"researchmap","nameIdentifierURI":"http://researchmap.jp/read0165203"}]},{"creatorNames":[{"creatorName":"佐藤, 明彦"},{"creatorName":"サトウ, アキヒコ","creatorNameLang":"ja-Kana"},{"creatorName":"SATO, Akihiko","creatorNameLang":"en"}],"nameIdentifiers":[{"nameIdentifier":"418","nameIdentifierScheme":"WEKO"},{"nameIdentifier":"30355440","nameIdentifierScheme":"e-Rad","nameIdentifierURI":"https://kaken.nii.ac.jp/ja/search/?qm=30355440"},{"nameIdentifier":"sato_akihiko.fruit","nameIdentifierScheme":"researchmap","nameIdentifierURI":"http://researchmap.jp/sato_akihiko.fruit"}]}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2021-10-28"}],"displaytype":"detail","filename":"SC30201804040003-C30201803160001_Postprint.pdf","filesize":[{"value":"340.2 kB"}],"format":"application/pdf","licensetype":"license_11","mimetype":"application/pdf","url":{"label":"SC30201804040003-C30201803160001_Postprint","url":"https://repository.naro.go.jp/record/2712/files/SC30201804040003-C30201803160001_Postprint.pdf"},"version_id":"f26086d2-08df-4d23-bd6f-54abcf82d6eb"},{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2021-10-28"}],"displaytype":"detail","filename":"SC30201804040003-C30201803160001_Postprint-fig.pdf","filesize":[{"value":"289.9 kB"}],"format":"application/pdf","licensetype":"license_11","mimetype":"application/pdf","url":{"label":"SC30201804040003-C30201803160001_Postprint-fig","url":"https://repository.naro.go.jp/record/2712/files/SC30201804040003-C30201803160001_Postprint-fig.pdf"},"version_id":"80890daa-7094-4948-96f9-07cfd6696d25"},{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2021-10-28"}],"displaytype":"detail","filename":"SC30201804040003-C30201803160001_Postprint-table.pdf","filesize":[{"value":"761.4 kB"}],"format":"application/pdf","licensetype":"license_11","mimetype":"application/pdf","url":{"label":"SC30201804040003-C30201803160001_Postprint-table","url":"https://repository.naro.go.jp/record/2712/files/SC30201804040003-C30201803160001_Postprint-table.pdf"},"version_id":"c23d7d29-f6d6-4baa-9830-bf0a2efbfd0e"}]},"item_keyword":{"attribute_name":"キーワード","attribute_value_mlt":[{"subitem_subject":"Astringency","subitem_subject_scheme":"Other"},{"subitem_subject":"Breeding","subitem_subject_scheme":"Other"},{"subitem_subject":"Fruit tree","subitem_subject_scheme":"Other"},{"subitem_subject":"Genetic resources","subitem_subject_scheme":"Other"},{"subitem_subject":"PCNA","subitem_subject_scheme":"Other"},{"subitem_subject":"Polyploidy","subitem_subject_scheme":"Other"},{"subitem_subject":"Astringency","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Breeding","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Fruit tree","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Genetic resources","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"PCNA","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Polyploidy","subitem_subject_language":"en","subitem_subject_scheme":"Other"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"SSR-based molecular profiling of 237 persimmon (Diospyros kaki Thunb.) germplasms using an ASTRINGENCY-linked marker","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"SSR-based molecular profiling of 237 persimmon (Diospyros kaki Thunb.) germplasms using an ASTRINGENCY-linked marker"},{"subitem_title":"SSR-based molecular profiling of 237 persimmon (Diospyros kaki Thunb.) germplasms using an ASTRINGENCY-linked marker","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"11","path":["40","137"],"pubdate":{"attribute_name":"公開日","attribute_value":"2019-09-27"},"publish_date":"2019-09-27","publish_status":"0","recid":"2712","relation_version_is_last":true,"title":["SSR-based molecular profiling of 237 persimmon (Diospyros kaki Thunb.) germplasms using an ASTRINGENCY-linked marker"],"weko_creator_id":"11","weko_shared_id":-1},"updated":"2023-05-15T15:05:47.229987+00:00"}